Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909403.1_cds_XP_016459621.1_53130
CDS Infomation

[gene=LOC107783158] [db_xref=GeneID:107783158] [protein=inactive poly [ADP-ribose] polymerase RCD1-like isoform X2] [protein_id=XP_016459621.1] [location=complement(join(93306..93353,93773..93868,93978..94094,95119..95207,96065..96306,96642..97741))] [gbkey=CDS]
Sequence

ATGGAATCAAAGTTGTTTGAATTGTTAGATAATGGCCATAGGACTGTGGTTGGATCAAAG
AGGAAAGTGGCTTCTCAAAATTTGGCTCATTTATTTAGAGCCAACAGTGAGAAACTGTCA
ATTCAATCCAACCATGATAGCAAGCTTGGAGAGAGGAAAAGGACTGCTGAGTGCGAGTCT
AATTTTCAGTCACATCTCAGCAAATCTTTACTCAAGAACTACTTAAACTTTATGAGAAGC
AGACTACCACAACGGGTACTATTTTATCAGAATGGTGAATGGACTGATTTCCCTCAAGAT
ATTATTCTTATAGTTAAAGAAGATTTTCGGGCAAAAAAGGCTGTTATTGAGGTGAAAGTC
GGTGGCTTTCATTTAATGCTTGATATTCTATATATGGTTCAAATAGATCTGATTAATGGT
TTGCACAAACCTATTGCCTGGATAGATGAAGCAGGTGGCTGTTTCTTCCCCGAGTCATAT
CTCGTCAGTTGTGAAATGCATGGGAACTTTGAAAGCCAGTCAAAGAAAATCAAAGAGTTT
ATGGCTATTGAACAAGATAGGGTAGCTGATATTAAGTTGCAACTCGAAATTGATTTTAAT
GGACTGGAAAATAGTAATTTGGAAGAATGTGTGGAAGAGTCAAATGTTGGTTTTAAGAGG
ATTAAAGTAAATCCTGTTAAAGACAATCAAGAATGTGCTGATGATAAAAAATCAGATGCA
AAAGTGGAACAAGTTGCAGAGAATAAACAGAACCAGGAAACAAGGACTCCTGCTGTAGTT
GCTAGCCTGAAATTGGTGGATGCAGAATCTGTCAAAAATATGTTTGTTATGGGAATGAAT
ATCATCCCTAAAGTGGATGAAATCAAAATTACCAAATGCTCTAGTAATTATTTGAAAACT
CGCTTGGAACTCTTTGAGAAGCAAATTGAAATAACCCAAAATTATCGTGGTAATGCAAAT
GTTCGATATGCTTGGCTTGCCGCTTCCAAAGATTTACTATATACAATTATGAACTATGGC
CTTGCACTTGGGGGACCTAAACGTAAGACTAAATTTGGAGTCGGAGTTCACCTCAGTACT
CTGCATTGTGCCTCCAAAAGTGCAATTAGTTGTGATGTTGACGAAAATGGCATCCGCTAT
ATGGTTTTTACTCGTGTGATTTTGGGTAATGTGGAACTTTTGAATAGCCGATCTGAACAA
TGTTGTCCCATTGATGAAAAATACGATAGCGGAGTTGATGATCTAGAGAATCCTACTTGT
TATGTTGTTTGGAATATGAATATGAACACACACATATACCCGGAGTATGTTGTGAGCTTC
AGAATTCCTCCAGGAGCTGAAGGACCCCACTTCAGAAATGATAGCCGGATGCATGTCTCA
GGTGACAGTACTTGTTGTCAGGGCCCCACAGATACATTTCCTAAGGACTTGGCTGCAAGG
ACTCCGAAGTCCCCTTGGATGCCATTCCCCTTGTTGTTTGCTGCAATCTCCAATGAAGTT
CCTGCAGAGAAGATGAACCTTGTTACTAGCAATTTTGAGTTGTTTAAGAGCAAGAAGATA
AGTAGGGATGAATTTGTCAGACAGTTGAGGTTGATAGTAGGCGATACTCTGTTGAGGTCC
ACAATTACAAATCTTCAGTTCAAGGTACCATCTAAATCCTTTGAAATGGTTCCGCGAAAG
CAAGAGCCCTAG

Peptide Sequence

PEP ID

XP_016459621.1
PEP Infomation

PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Nicotiana tabacum]
Sequence

MESKLFELLDNGHRTVVGSKRKVASQNLAHLFRANSEKLSIQSNHDSKLGERKRTAECES
NFQSHLSKSLLKNYLNFMRSRLPQRVLFYQNGEWTDFPQDIILIVKEDFRAKKAVIEVKV
GGFHLMLDILYMVQIDLINGLHKPIAWIDEAGGCFFPESYLVSCEMHGNFESQSKKIKEF
MAIEQDRVADIKLQLEIDFNGLENSNLEECVEESNVGFKRIKVNPVKDNQECADDKKSDA
KVEQVAENKQNQETRTPAVVASLKLVDAESVKNMFVMGMNIIPKVDEIKITKCSSNYLKT
RLELFEKQIEITQNYRGNANVRYAWLAASKDLLYTIMNYGLALGGPKRKTKFGVGVHLST
LHCASKSAISCDVDENGIRYMVFTRVILGNVELLNSRSEQCCPIDEKYDSGVDDLENPTC
YVVWNMNMNTHIYPEYVVSFRIPPGAEGPHFRNDSRMHVSGDSTCCQGPTDTFPKDLAAR
TPKSPWMPFPLLFAAISNEVPAEKMNLVTSNFELFKSKKISRDEFVRQLRLIVGDTLLRS
TITNLQFKVPSKSFEMVPRKQEP

Transcript Sequence

Gene sequence data has not been registered.